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rVarBase
SNP Report
Basic Infomation
Name
rs34054191  
dbSNP
Location
chr:1,1250957
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 7)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11260562
1.00[CEU][hapmap]
rs11260570
1.00[GIH][hapmap]
rs3813205
1.00[AFR][1000 genomes]
rs41285826
1.00[AFR][1000 genomes]
rs6667923
1.00[GIH][hapmap]
rs72563729
1.00[AFR][1000 genomes]
rs7524470
1.00[GIH][hapmap]
rSNP related genes
Symbol
Regulation type
CPSF3L
Proximal transcriptional regulation
CPSF3L
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)