SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 16)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10896002	0.91[EUR][1000 genomes]
rs1194758	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12800581	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1784099	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1787666	0.80[AFR][1000 genomes];0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2957267	0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2957270	0.88[EUR][1000 genomes]
rs2957271	0.86[EUR][1000 genomes]
rs3016342	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3132770	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35940245	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs616599	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs667196	0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs679643	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs686320	0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72643572	0.95[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
NEAT1	Distal transcriptional regulation
MIR612	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)