SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 5)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11746464	0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.89[GIH][hapmap];0.95[JPT][hapmap];0.96[MEX][hapmap];0.89[TSI][hapmap];0.94[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1291603	0.82[AMR][1000 genomes]
rs13157685	0.81[AMR][1000 genomes]
rs2549012	0.92[CEU][hapmap]
rs3756295	1.00[ASW][hapmap];0.84[CEU][hapmap];0.95[CHB][hapmap];0.86[CHD][hapmap];0.81[GIH][hapmap];0.90[JPT][hapmap];1.00[LWK][hapmap];0.84[TSI][hapmap]

rSNP related genes

Symbol	Regulation type
RAPGEF6	RNA binding protein mediated regulation
FNIP1	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 5)