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rVarBase
SNP Report
Basic Infomation
Name
rs297929  
dbSNP
Location
chr:12,50286837
Allele
A/G
LD-proxy of rSNPs(r
2
>0.8) (count: 8)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs297919
1.00[AMR][1000 genomes]
rs297920
1.00[AMR][1000 genomes]
rs297925
0.89[YRI][hapmap];1.00[AMR][1000 genomes]
rs297926
1.00[AMR][1000 genomes]
rs297927
1.00[AMR][1000 genomes]
rs297928
0.82[YRI][hapmap]
rs584830
0.90[YRI][hapmap];1.00[AMR][1000 genomes]
rs585255
1.00[AMR][1000 genomes]
rSNP related genes
Symbol
Regulation type
FAIM2
Distal transcriptional regulation
FAIM2
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)