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rVarBase
SNP Report
Basic Infomation
Name
rs2975780  
dbSNP
Location
chr:2,241563652
Allele
T/A
LD-proxy of rSNPs(r
2
>0.8) (count: 7)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs2953153
1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2975781
0.90[CHB][hapmap];1.00[JPT][hapmap]
rs2975782
1.00[CHB][hapmap];0.94[JPT][hapmap]
rs2975785
1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2975788
0.90[CHB][hapmap];1.00[JPT][hapmap]
rs3749172
1.00[CHB][hapmap];0.94[JPT][hapmap]
rs4676410
1.00[CHB][hapmap];1.00[JPT][hapmap]
rSNP related genes
Symbol
Regulation type
GPR35
Proximal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)