Home
Search
List search
Advanced Search
Data content
Tutorial
About Us
Feedback
rVarBase
SNP Report
Basic Infomation
Name
rs2651244  
dbSNP
Location
chr:1,70995562
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 7)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs1995301
0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2651241
0.82[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2651242
1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];0.98[ASN][1000 genomes]
rs2651243
1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs2651245
1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs2651246
1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs2807905
0.89[JPT][hapmap]
rSNP related genes
Symbol
Regulation type
ENSG00000233020
Proximal transcriptional regulation
PTGER3
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 1)
eQTL related gene
Source
PTGER3
SCAN