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rVarBase
SNP Report
Basic Infomation
Name
rs243332  
dbSNP
Location
chr:16,11349678
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 1)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs2021511
0.91[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
SLC25A3
Distal transcriptional regulation
ETF1
Distal transcriptional regulation
CLEC16A
Distal transcriptional regulation
ENSG00000262020
Distal transcriptional regulation
ENSG00000263080
Distal transcriptional regulation
RMI2
Distal transcriptional regulation
ENSG00000238774
Distal transcriptional regulation
ENSG00000262636
Distal transcriptional regulation
PRM3
Distal transcriptional regulation
ENSG00000212228
Distal transcriptional regulation
TNP2
Distal transcriptional regulation
ENSG00000263033
Distal transcriptional regulation
ENSG00000262703
Distal transcriptional regulation
ENSG00000188897
Distal transcriptional regulation
ENSG00000199668
Distal transcriptional regulation
ARPP19
Distal transcriptional regulation
ENSG00000263179
Distal transcriptional regulation
PRM1
Distal transcriptional regulation
ENSG00000238409
Distal transcriptional regulation
PRM2
Distal transcriptional regulation
VPS72
Distal transcriptional regulation
RMI2
RNA binding protein mediated regulation
SOCS1
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)