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rVarBase
SNP Report
Basic Infomation
Name
rs2297901  
dbSNP
Location
chr:1,201035607
Allele
G/T
LD-proxy of rSNPs(r
2
>0.8) (count: 1)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs3820421
0.87[JPT][hapmap]
rSNP related genes
Symbol
Regulation type
ASCL5
Distal transcriptional regulation
CACNA1S
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 5)
eQTL related gene
Source
GPR37L1
SCAN
KDM5B
SCAN
LAIR1
SCAN
HCP5P10
SCAN
LAIR2
SCAN