SNP Report
Name | rs2231884   dbSNP |
---|---|
Location | chr:11,65656564 |
Allele | C/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10791830 | 1.00[GIH][hapmap];0.93[MEX][hapmap];0.82[TSI][hapmap];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes] |
rs10896050 | 0.81[CEU][hapmap] |
rs11227333 | 0.85[EUR][1000 genomes] |
rs1151519 | 0.85[EUR][1000 genomes] |
rs1204650 | 0.85[EUR][1000 genomes] |
rs12225345 | 0.83[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs17854357 | 0.86[EUR][1000 genomes] |
rs507062 | 0.83[EUR][1000 genomes] |
rs568617 | 1.00[GIH][hapmap];0.81[JPT][hapmap];0.93[MEX][hapmap];0.85[EUR][1000 genomes] |
rs583887 | 1.00[GIH][hapmap];0.81[JPT][hapmap];0.85[MEX][hapmap];0.84[EUR][1000 genomes] |
rs585557 | 0.80[EUR][1000 genomes] |
rs58568715 | 0.81[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs588114 | 0.83[EUR][1000 genomes] |
rs596002 | 0.83[EUR][1000 genomes] |
rs601863 | 1.00[GIH][hapmap];0.81[JPT][hapmap];0.93[MEX][hapmap];0.85[EUR][1000 genomes] |
rs608616 | 0.81[EUR][1000 genomes] |
rs622614 | 1.00[GIH][hapmap];0.93[MEX][hapmap];0.80[EUR][1000 genomes] |
rs641018 | 0.81[JPT][hapmap];0.86[EUR][1000 genomes] |
rs645900 | 1.00[GIH][hapmap];0.81[JPT][hapmap];0.93[MEX][hapmap];0.85[EUR][1000 genomes] |
rs656980 | 1.00[GIH][hapmap];0.81[JPT][hapmap];0.93[MEX][hapmap];0.80[TSI][hapmap];0.86[EUR][1000 genomes] |
rs658524 | 1.00[GIH][hapmap];0.81[JPT][hapmap];0.93[MEX][hapmap];0.85[EUR][1000 genomes] |
rs658938 | 1.00[GIH][hapmap];0.81[JPT][hapmap];0.93[MEX][hapmap];0.85[EUR][1000 genomes] |
rs677931 | 0.85[EUR][1000 genomes] |
rs687672 | 1.00[GIH][hapmap];0.81[JPT][hapmap];0.86[MEX][hapmap];0.85[EUR][1000 genomes] |
rs693824 | 0.85[EUR][1000 genomes] |
rs694994 | 1.00[GIH][hapmap];0.81[JPT][hapmap];0.93[MEX][hapmap];0.85[EUR][1000 genomes] |
Symbol | Regulation type |
---|---|
FIBP | Proximal transcriptional regulation |
CCDC85B | Proximal transcriptional regulation |
UBE2C | Distal transcriptional regulation |
SRSF7 | Distal transcriptional regulation |
DPF2 | Distal transcriptional regulation |
RELA | Distal transcriptional regulation |
KAT5 | Distal transcriptional regulation |
RNASEH2C | Distal transcriptional regulation |
ENSG00000255120 | Distal transcriptional regulation |
OVOL1 | Distal transcriptional regulation |
ENSG00000255038 | Distal transcriptional regulation |
PACS1 | Distal transcriptional regulation |
SF3B2 | Distal transcriptional regulation |
ENSG00000254458 | Distal transcriptional regulation |
AP5B1 | Distal transcriptional regulation |
CATSPER1 | Distal transcriptional regulation |
ENSG00000260233 | Distal transcriptional regulation |
SSSCA1 | Distal transcriptional regulation |
MAP3K11 | Distal transcriptional regulation |
PCNXL3 | Distal transcriptional regulation |
CTSW | Distal transcriptional regulation |
C11orf68 | Distal transcriptional regulation |
DRAP1 | Distal transcriptional regulation |
SART1 | Distal transcriptional regulation |
ENSG00000254762 | Distal transcriptional regulation |
RAB1B | Distal transcriptional regulation |
BANF1 | Distal transcriptional regulation |
CST6 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014