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rVarBase
SNP Report
Basic Infomation
Name
rs2231842  
dbSNP
Location
chr:20,44171292
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 5)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs6017617
1.00[CEU][hapmap]
rs73114863
1.00[AFR][1000 genomes]
rs73116853
1.00[AFR][1000 genomes]
rs73124654
1.00[AFR][1000 genomes]
rs73127383
1.00[AFR][1000 genomes]
rSNP related genes
Symbol
Regulation type
HSPD1P21
Proximal transcriptional regulation
WFDC6
Proximal transcriptional regulation
EPPIN
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)