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rVarBase
SNP Report
Basic Infomation
Name
rs2071213  
dbSNP
Location
chr:11,61534010
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 4)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs12791843
0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs174527
0.81[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs2071212
1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs2269928
0.82[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
MYRF
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 7)
eQTL related gene
Source
C11orf66
SCAN
C11orf84
SCAN
GPR44
SCAN
TMEM109
SCAN
COX8A
SCAN
INTS5
SCAN
BSCL2
SCAN