SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 8)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10167431	0.85[CHB][hapmap];0.85[CHD][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs12474258	0.92[CEU][hapmap];0.85[CHB][hapmap];0.83[CHD][hapmap]
rs1922291	0.92[CEU][hapmap];0.84[CHB][hapmap];0.83[JPT][hapmap]
rs1922302	0.92[CEU][hapmap];0.85[CHB][hapmap];0.83[CHD][hapmap]
rs2302621	0.92[CEU][hapmap];0.85[CHB][hapmap];0.84[JPT][hapmap];0.82[ASN][1000 genomes]
rs3917286	1.00[LWK][hapmap]
rs6743219	0.92[CEU][hapmap];0.84[CHB][hapmap];0.83[JPT][hapmap]
rs917994	0.92[CEU][hapmap];0.85[CHB][hapmap]

rSNP related genes

Symbol	Regulation type
SNORD118	Distal transcriptional regulation
IL1R1	Distal transcriptional regulation
IL1RL2	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 3)