SNP Report

Basic Infomation

Name	rs1991866 dbSNP
Location	chr:8,130624105
Allele	G/C

LD-proxy of rSNPs(r²>0.8) (count: 23)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10098310	0.96[CEU][hapmap];0.81[JPT][hapmap];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10103048	0.85[CEU][hapmap];0.87[GIH][hapmap];0.84[TSI][hapmap];0.83[EUR][1000 genomes]
rs10107630	0.92[CEU][hapmap];0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12544501	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs13276769	0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs13277237	0.96[CEU][hapmap];0.84[GIH][hapmap];0.84[TSI][hapmap];0.89[EUR][1000 genomes]
rs13280084	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1579555	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1865223	0.96[CEU][hapmap];0.87[GIH][hapmap];0.82[TSI][hapmap];0.91[EUR][1000 genomes]
rs2163952	0.96[CEU][hapmap];0.89[GIH][hapmap];0.90[LWK][hapmap];0.83[MEX][hapmap];0.86[TSI][hapmap];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2217715	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2395902	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2395905	0.96[CEU][hapmap];0.92[EUR][1000 genomes]
rs2395906	0.96[CEU][hapmap];0.87[GIH][hapmap];0.83[MEX][hapmap];0.84[TSI][hapmap];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs28500514	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs28854585	0.81[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs35389394	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4291235	0.81[AFR][1000 genomes];0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4407843	0.96[CEU][hapmap];0.91[EUR][1000 genomes]
rs4480083	0.96[CEU][hapmap];0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4486162	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs55964818	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6989110	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
CCDC26	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)