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rVarBase
SNP Report
Basic Infomation
Name
rs190099  
dbSNP
Location
chr:20,31648471
Allele
C/G
LD-proxy of rSNPs(r
2
>0.8) (count: 5)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs2424938
0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs370177
0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs399355
0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs403461
0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs761937
0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
ENSG00000263856
Proximal transcriptional regulation
BPIFB3
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)