SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 14)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10922324	0.87[MKK][hapmap]
rs11583319	0.84[CEU][hapmap];0.82[TSI][hapmap]
rs12117045	0.89[CEU][hapmap];0.91[GIH][hapmap];0.88[MEX][hapmap];0.91[TSI][hapmap];0.87[EUR][1000 genomes]
rs12131588	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12141028	0.94[MEX][hapmap];0.85[TSI][hapmap]
rs1539414	0.94[CEU][hapmap];0.91[GIH][hapmap];0.88[MEX][hapmap];0.94[TSI][hapmap];0.85[EUR][1000 genomes]
rs16841904	1.00[CEU][hapmap];0.91[GIH][hapmap];0.88[MEX][hapmap];0.91[TSI][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs16841912	1.00[CEU][hapmap];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2477077	0.94[CEU][hapmap];0.91[GIH][hapmap];0.88[MEX][hapmap];0.85[TSI][hapmap];0.91[EUR][1000 genomes]
rs2488389	1.00[CEU][hapmap];0.91[GIH][hapmap];0.88[MEX][hapmap];0.91[TSI][hapmap];0.87[EUR][1000 genomes]
rs2488393	1.00[CEU][hapmap];0.93[EUR][1000 genomes]
rs2488397	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2488398	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2488401	0.94[CEU][hapmap];0.87[GIH][hapmap];0.82[MEX][hapmap];0.91[TSI][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
DENND1B	Proximal transcriptional regulation
ENSG00000235582	Proximal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 1)