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rVarBase
SNP Report
Basic Infomation
Name
rs17490907  
dbSNP
Location
chr:12,40665580
Allele
A/G
LD-proxy of rSNPs(r
2
>0.8) (count: 9)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11836348
1.00[AMR][1000 genomes]
rs17489597
1.00[YRI][hapmap]
rs17490341
1.00[YRI][hapmap]
rs17490914
0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17491054
1.00[AMR][1000 genomes]
rs17491333
1.00[AMR][1000 genomes]
rs17518483
1.00[YRI][hapmap]
rs17519999
1.00[AMR][1000 genomes]
rs17520020
1.00[AMR][1000 genomes]
rSNP related genes
Symbol
Regulation type
LRRK2
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)