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rVarBase
SNP Report
Basic Infomation
Name
rs17156231  
dbSNP
Location
chr:11,61473868
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 6)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11827215
0.90[YRI][hapmap]
rs17156381
0.90[LWK][hapmap];1.00[TSI][hapmap];0.83[AMR][1000 genomes]
rs2868407
1.00[TSI][hapmap]
rs7925523
1.00[YRI][hapmap]
rs7942387
0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs883724
0.90[YRI][hapmap]
rSNP related genes
Symbol
Regulation type
RPLP0P2
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)