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rVarBase
SNP Report
Basic Infomation
Name
rs17106118  
dbSNP
Location
chr:14,69132264
Allele
T/C
LD-proxy of rSNPs(r
2
>0.8) (count: 5)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10136323
0.86[CHB][hapmap];1.00[CHD][hapmap]
rs10150973
1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs17106094
0.81[ASN][1000 genomes]
rs17756800
0.97[ASN][1000 genomes]
rs2024945
0.97[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
ZFP36L1
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 3)
eQTL related gene
Source
GATA3
seeQTL
ZBTB25
SCAN
GPX2
SCAN