Home
Search
List search
Advanced Search
Data content
Tutorial
About Us
Feedback
rVarBase
SNP Report
Basic Infomation
Name
rs17027534  
dbSNP
Location
chr:2,103209425
Allele
T/C
LD-proxy of rSNPs(r
2
>0.8) (count: 6)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs12053526
1.00[MEX][hapmap]
rs17027513
1.00[YRI][hapmap]
rs17027666
1.00[MEX][hapmap]
rs17027723
1.00[MEX][hapmap]
rs61592588
0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6543156
1.00[MEX][hapmap]
rSNP related genes
Symbol
Regulation type
SLC9A4
Distal transcriptional regulation
SLC9A2
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 2)
eQTL related gene
Source
LAP3
SCAN
HOXB2
seeQTL