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rVarBase
SNP Report
Basic Infomation
Name
rs16912229  
dbSNP
Location
chr:10,60166809
Allele
A/C
LD-proxy of rSNPs(r
2
>0.8) (count: 7)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11006138
1.00[CEU][hapmap];0.96[EUR][1000 genomes]
rs12252511
0.91[EUR][1000 genomes]
rs16912172
1.00[GIH][hapmap]
rs16912173
1.00[MEX][hapmap];0.90[TSI][hapmap]
rs16912174
0.90[TSI][hapmap]
rs16912233
1.00[CEU][hapmap];1.00[GIH][hapmap];0.90[TSI][hapmap];0.96[EUR][1000 genomes]
rs35528209
0.91[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
TFAM
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)