SNP Report
Basic Infomation
| Name | rs16900750 dbSNP |
|---|---|
| Location | chr:8,126619043 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 35)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10095973 | 1.00[EUR][1000 genomes] |
| rs12548259 | 1.00[EUR][1000 genomes] |
| rs13364666 | 0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs13364676 | 0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs13364688 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs13364791 | 0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs1979224 | 1.00[EUR][1000 genomes] |
| rs28589371 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs4372019 | 1.00[EUR][1000 genomes] |
| rs56699992 | 1.00[EUR][1000 genomes] |
| rs58950777 | 1.00[EUR][1000 genomes] |
| rs59505399 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs60394496 | 1.00[EUR][1000 genomes] |
| rs61501580 | 1.00[EUR][1000 genomes] |
| rs61571801 | 0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs61589624 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs6990459 | 1.00[EUR][1000 genomes] |
| rs7010651 | 1.00[EUR][1000 genomes] |
| rs73336675 | 1.00[EUR][1000 genomes] |
| rs73338611 | 1.00[EUR][1000 genomes] |
| rs73338686 | 1.00[EUR][1000 genomes] |
| rs73338687 | 1.00[EUR][1000 genomes] |
| rs73346808 | 1.00[EUR][1000 genomes] |
| rs73346811 | 1.00[EUR][1000 genomes] |
| rs73346881 | 1.00[EUR][1000 genomes] |
| rs73346898 | 1.00[EUR][1000 genomes] |
| rs73349008 | 1.00[EUR][1000 genomes] |
| rs73349041 | 1.00[EUR][1000 genomes] |
| rs73349074 | 1.00[EUR][1000 genomes] |
| rs73706855 | 1.00[EUR][1000 genomes] |
| rs7834570 | 1.00[EUR][1000 genomes] |
| rs7835068 | 1.00[EUR][1000 genomes] |
| rs7835809 | 1.00[EUR][1000 genomes] |
| rs7845655 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs7845670 | 1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| TRIB1 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014