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rVarBase
SNP Report
Basic Infomation
Name
rs16847967  
dbSNP
Location
chr:1,201153938
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 7)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs12749395
1.00[YRI][hapmap]
rs16847933
1.00[AFR][1000 genomes]
rs16847974
1.00[YRI][hapmap];1.00[AFR][1000 genomes]
rs16847979
1.00[AFR][1000 genomes]
rs16847993
1.00[YRI][hapmap];0.90[AFR][1000 genomes]
rs3752975
0.82[YRI][hapmap]
rs9988424
1.00[AFR][1000 genomes]
rSNP related genes
Symbol
Regulation type
ENSG00000229821
Distal transcriptional regulation
TMEM9
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)