SNP Report
Basic Infomation
| Name | rs1675068 dbSNP |
|---|---|
| Location | chr:11,61922327 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 64)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs1380568 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1612738 | 0.80[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1612739 | 0.80[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1615317 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1616917 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1617696 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1630142 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1630740 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1630761 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1675066 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1675069 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1675070 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1675071 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1675072 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs1675073 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1675074 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1675075 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1675076 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1675092 | 0.86[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1675110 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1675111 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1675112 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1675114 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1675115 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1675116 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1675117 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1675118 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1675119 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1675120 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1792880 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1792881 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1792883 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1792884 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1792885 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1792887 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1792889 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1792890 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1792891 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1792892 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1792893 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1792894 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1792895 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1792896 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1792921 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1792923 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1792924 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1792925 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1792926 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1792927 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1792928 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1792929 | 0.92[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1792931 | 0.86[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs1792947 | 1.00[AMR][1000 genomes] |
| rs2125849 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs2246572 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs2254470 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs2926523 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs2958341 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs3018375 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs3018376 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs3018377 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs898379 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs898381 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs898382 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| INCENP | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014