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rVarBase
SNP Report
Basic Infomation
Name
rs1468280  
dbSNP
Location
chr:14,69031860
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 6)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs2525503
0.96[CEU][hapmap];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2525504
0.83[JPT][hapmap];0.82[ASN][1000 genomes]
rs2842327
0.85[AMR][1000 genomes]
rs7153476
1.00[CEU][hapmap];0.97[EUR][1000 genomes]
rs8007194
0.95[CEU][hapmap];0.97[EUR][1000 genomes]
rs8016149
0.80[CHB][hapmap];0.84[JPT][hapmap];0.83[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
ZFP36L1
Distal transcriptional regulation
RAD51B
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)