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rVarBase
SNP Report
Basic Infomation
Name
rs13330025  
dbSNP
Location
chr:16,85937533
Allele
A/T
LD-proxy of rSNPs(r
2
>0.8) (count: 14)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11117413
1.00[AMR][1000 genomes]
rs11117414
1.00[AMR][1000 genomes]
rs11117432
1.00[YRI][hapmap]
rs11865854
1.00[AMR][1000 genomes]
rs12325654
1.00[AMR][1000 genomes]
rs13330075
1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17445836
1.00[YRI][hapmap]
rs301169
1.00[YRI][hapmap]
rs305064
1.00[YRI][hapmap]
rs305065
1.00[YRI][hapmap]
rs305067
1.00[YRI][hapmap]
rs8050756
1.00[YRI][hapmap]
rs9938002
1.00[AMR][1000 genomes]
rs9938084
1.00[AMR][1000 genomes]
rSNP related genes
Symbol
Regulation type
IRF8
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)