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rVarBase
SNP Report
Basic Infomation
Name
rs12880237  
dbSNP
Location
chr:14,68621818
Allele
A/G
LD-proxy of rSNPs(r
2
>0.8) (count: 6)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11846526
0.85[YRI][hapmap]
rs12437043
0.89[YRI][hapmap]
rs1555944
0.85[ASW][hapmap];0.95[YRI][hapmap];0.80[AFR][1000 genomes]
rs17105269
0.85[YRI][hapmap]
rs1958114
1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6573817
0.85[ASW][hapmap];0.82[MKK][hapmap];0.95[YRI][hapmap]
rSNP related genes
Symbol
Regulation type
RAD51B
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)