SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 25)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1057275	1.00[JPT][hapmap]
rs1057276	1.00[JPT][hapmap]
rs11086977	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11086980	1.00[JPT][hapmap]
rs11697000	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11698486	1.00[JPT][hapmap]
rs12479752	1.00[AFR][1000 genomes]
rs12480250	1.00[JPT][hapmap]
rs12481641	1.00[AFR][1000 genomes]
rs12481720	1.00[CHB][hapmap]
rs13040683	1.00[JPT][hapmap]
rs1487313	1.00[AFR][1000 genomes]
rs170800	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs397522	1.00[CEU][hapmap];0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4812951	1.00[AFR][1000 genomes]
rs4812956	1.00[AFR][1000 genomes]
rs4812963	1.00[CEU][hapmap]
rs6065890	1.00[JPT][hapmap]
rs6065894	1.00[JPT][hapmap]
rs6073865	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6073921	1.00[JPT][hapmap]
rs6073931	1.00[JPT][hapmap]
rs6073932	1.00[JPT][hapmap]
rs6073935	1.00[JPT][hapmap]
rs6073937	1.00[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
WFDC10B	Proximal transcriptional regulation
MIR3617	Proximal transcriptional regulation
WFDC13	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)