SNP Report
Name | rs12257782   dbSNP |
---|---|
Location | chr:10,35552158 |
Allele | T/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs1057108 | 0.82[ASN][1000 genomes] |
rs11010121 | 0.82[ASN][1000 genomes] |
rs11010122 | 0.82[ASN][1000 genomes] |
rs11010129 | 0.85[ASN][1000 genomes] |
rs11010130 | 0.84[ASN][1000 genomes] |
rs11010131 | 0.84[ASN][1000 genomes] |
rs11010132 | 0.82[ASN][1000 genomes] |
rs11010133 | 0.82[ASN][1000 genomes] |
rs11010134 | 0.82[ASN][1000 genomes] |
rs11010135 | 0.82[ASN][1000 genomes] |
rs11010146 | 0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs1148245 | 0.88[ASN][1000 genomes] |
rs1148246 | 0.83[ASN][1000 genomes] |
rs11592798 | 0.85[ASN][1000 genomes] |
rs12098264 | 0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs12098266 | 0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs12098720 | 0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs12240638 | 0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs12242110 | 0.91[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs12243593 | 0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12246600 | 0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs12249814 | 0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs12250016 | 0.88[AMR][1000 genomes] |
rs12254018 | 0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs12254043 | 0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs12254167 | 0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12255409 | 0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs12257770 | 0.82[ASN][1000 genomes] |
rs12261843 | 0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12775548 | 0.82[ASN][1000 genomes] |
rs12775799 | 0.82[ASN][1000 genomes] |
rs12777960 | 0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs16935945 | 0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs16935948 | 0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs16935949 | 0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs17500582 | 0.82[ASN][1000 genomes] |
rs17591781 | 0.82[ASN][1000 genomes] |
rs17591857 | 0.82[ASN][1000 genomes] |
rs2384352 | 0.82[ASN][1000 genomes] |
rs34195979 | 0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs34397613 | 0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs34421369 | 0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs34592588 | 0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs35079558 | 0.83[ASN][1000 genomes] |
rs35308730 | 0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs35969476 | 0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs36027395 | 0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs36108434 | 0.80[AMR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs3780886 | 0.82[ASN][1000 genomes] |
rs3853672 | 0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs3867218 | 0.91[ASN][1000 genomes] |
rs3936502 | 0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs3936503 | 0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4007271 | 0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4007272 | 0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4102764 | 0.83[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs4244995 | 0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4244997 | 0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4275563 | 0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs4298846 | 0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4391768 | 0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4444023 | 0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4579882 | 0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4934735 | 0.82[ASN][1000 genomes] |
rs4934736 | 0.82[ASN][1000 genomes] |
rs4934737 | 0.85[ASN][1000 genomes] |
rs4934740 | 0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs59287215 | 0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs60553075 | 0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs61449529 | 0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs6481950 | 0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7070427 | 0.82[ASN][1000 genomes] |
rs7070778 | 0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs7077242 | 0.82[ASN][1000 genomes] |
rs7081597 | 0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7083266 | 0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs7086715 | 0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs7087099 | 0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs7087150 | 0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs73262807 | 0.82[ASN][1000 genomes] |
rs7897088 | 0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs7901681 | 0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs7904625 | 0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs7905768 | 0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs7910443 | 0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7913451 | 0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs7914468 | 0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7914560 | 0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
CCNY | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014