SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 9)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10509640	0.90[LWK][hapmap];0.96[MKK][hapmap];0.83[YRI][hapmap];0.83[AFR][1000 genomes]
rs11186744	0.83[AFR][1000 genomes]
rs12252682	1.00[CHB][hapmap];0.82[ASN][1000 genomes]
rs12254369	0.83[AFR][1000 genomes]
rs12263639	0.83[YRI][hapmap]
rs12266974	0.83[AFR][1000 genomes]
rs2048901	0.90[LWK][hapmap];0.96[MKK][hapmap];0.83[YRI][hapmap]
rs4509678	0.83[YRI][hapmap];0.83[AFR][1000 genomes]
rs7915659	0.85[AFR][1000 genomes]

rSNP related genes

Symbol	Regulation type
BTAF1	Distal transcriptional regulation
BTAF1	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)