SNP Report

Basic Infomation

Name	rs11675988 dbSNP
Location	chr:2,102941019
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 31)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10182639	0.82[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs10189202	0.82[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs10189711	0.81[ASN][1000 genomes]
rs10191914	0.82[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs11123918	0.80[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs11123920	0.84[AFR][1000 genomes];0.81[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs11123921	0.85[AFR][1000 genomes];0.80[ASN][1000 genomes]
rs11674832	0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11676075	0.84[AFR][1000 genomes];0.81[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs11679191	0.80[ASN][1000 genomes]
rs11679900	0.86[AFR][1000 genomes];0.81[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs11685424	0.80[ASN][1000 genomes]
rs11685480	0.80[ASN][1000 genomes]
rs11690443	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs12476925	0.80[ASN][1000 genomes]
rs12476968	0.80[ASN][1000 genomes]
rs12712136	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs13020793	0.80[AFR][1000 genomes];0.80[ASN][1000 genomes]
rs1420088	0.84[AFR][1000 genomes];0.81[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs1558619	0.82[ASN][1000 genomes]
rs1558620	0.82[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs1558621	0.82[ASN][1000 genomes]
rs1558622	0.82[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs1968171	0.80[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs4142132	0.84[AFR][1000 genomes];0.81[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs4613307	0.82[ASN][1000 genomes]
rs6706844	0.81[ASN][1000 genomes]
rs6721346	0.80[ASN][1000 genomes]
rs6733174	0.82[ASN][1000 genomes]
rs971764	0.82[ASN][1000 genomes]
rs974389	0.82[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
IL1RL1	RNA binding protein mediated regulation
IL18R1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)