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rVarBase
SNP Report
Basic Infomation
Name
rs11465643  
dbSNP
Location
chr:2,103001294
Allele
C/A
LD-proxy of rSNPs(r
2
>0.8) (count: 5)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10177815
0.91[AFR][1000 genomes]
rs10195976
0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11465655
0.93[AFR][1000 genomes]
rs11465687
0.90[AFR][1000 genomes]
rs13392126
0.93[AFR][1000 genomes]
rSNP related genes
Symbol
Regulation type
IL18R1
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)