SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10897169	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11230753	0.80[EUR][1000 genomes]
rs12281961	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12284414	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12287819	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12806760	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs17626916	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1812458	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4335555	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7930946	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs962370	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs962371	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CPSF7	Distal transcriptional regulation
SDHAF2	Distal transcriptional regulation
ENSG00000256591	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)