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rVarBase
SNP Report
Basic Infomation
Name
rs11173278  
dbSNP
Location
chr:12,40111061
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 8)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10877779
0.83[CEU][hapmap]
rs11173668
0.85[CEU][hapmap]
rs11173671
0.85[CEU][hapmap]
rs11833798
1.00[CHB][hapmap]
rs4128520
1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs4128689
0.83[CEU][hapmap]
rs55818213
1.00[ASN][1000 genomes]
rs58243970
1.00[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
C12orf40
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)