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rVarBase
SNP Report
Basic Infomation
Name
rs11171717  
dbSNP
Location
chr:12,39709770
Allele
G/T
LD-proxy of rSNPs(r
2
>0.8) (count: 14)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10243
1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[LWK][hapmap]
rs11171704
1.00[CHD][hapmap]
rs11171748
1.00[CHB][hapmap]
rs11172084
1.00[CHD][hapmap]
rs11172132
1.00[LWK][hapmap]
rs12227757
1.00[LWK][hapmap]
rs12817908
1.00[CHB][hapmap]
rs12831835
1.00[CHB][hapmap]
rs17127059
1.00[GIH][hapmap]
rs35717937
1.00[CHD][hapmap]
rs4768845
1.00[YRI][hapmap]
rs7303100
1.00[CHD][hapmap]
rs7957628
1.00[CHD][hapmap]
rs9668320
1.00[LWK][hapmap]
rSNP related genes
Symbol
Regulation type
KIF21A
Proximal transcriptional regulation
KIF21A
Distal transcriptional regulation
ENSG00000252974
Distal transcriptional regulation
KIF21A
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)