SNP Report
Basic Infomation
| Name | rs11010095 dbSNP |
|---|---|
| Location | chr:10,35395948 |
| Allele | A/G |
LD-proxy of rSNPs(r2>0.8) (count: 148)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10466072 | 0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes] |
| rs10508815 | 0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes] |
| rs10508816 | 0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes] |
| rs1057108 | 0.87[EUR][1000 genomes] |
| rs10827487 | 0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs10827491 | 0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs10827492 | 0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs10827493 | 0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs11010084 | 0.91[ASN][1000 genomes] |
| rs11010101 | 0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs11010102 | 0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs11010103 | 0.90[ASN][1000 genomes] |
| rs11010121 | 0.84[EUR][1000 genomes] |
| rs11010122 | 0.83[EUR][1000 genomes] |
| rs11010129 | 0.84[EUR][1000 genomes] |
| rs11010130 | 0.84[EUR][1000 genomes] |
| rs11010131 | 0.84[EUR][1000 genomes] |
| rs11010132 | 0.82[EUR][1000 genomes] |
| rs11010133 | 0.80[EUR][1000 genomes] |
| rs11010134 | 0.81[EUR][1000 genomes] |
| rs11010135 | 0.82[EUR][1000 genomes] |
| rs1148245 | 0.84[EUR][1000 genomes] |
| rs1148246 | 0.83[EUR][1000 genomes] |
| rs11592404 | 0.87[EUR][1000 genomes] |
| rs11592567 | 0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs11592798 | 0.83[EUR][1000 genomes] |
| rs11593858 | 0.80[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs11594196 | 0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs11596502 | 0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs11597336 | 0.87[EUR][1000 genomes] |
| rs11598666 | 0.92[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs11599606 | 0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs1213392 | 0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes] |
| rs12240347 | 0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes] |
| rs12248333 | 0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes] |
| rs12257770 | 0.82[EUR][1000 genomes] |
| rs12260130 | 0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs12261654 | 0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs12264697 | 0.81[EUR][1000 genomes] |
| rs12761675 | 0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs12762493 | 0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes] |
| rs12765038 | 0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs12767414 | 0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs12768019 | 0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes] |
| rs12769189 | 0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes] |
| rs12769484 | 0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs12769575 | 0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs12769981 | 0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes] |
| rs12771399 | 0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes] |
| rs12773169 | 0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs12773647 | 0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs12774834 | 0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes] |
| rs12775548 | 0.87[EUR][1000 genomes] |
| rs12775759 | 0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes] |
| rs12775799 | 0.86[EUR][1000 genomes] |
| rs12776390 | 0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes] |
| rs12777517 | 0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs12782948 | 0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs12784482 | 0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs12830 | 0.92[EUR][1000 genomes] |
| rs13376801 | 0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs13376871 | 0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs13377158 | 0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs1478463 | 0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs1545757 | 0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs16935880 | 0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs17499247 | 0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs17499811 | 0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs17500582 | 0.84[EUR][1000 genomes] |
| rs17583009 | 0.94[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs17591135 | 0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs17591163 | 0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs17591781 | 0.83[EUR][1000 genomes] |
| rs17591857 | 0.84[EUR][1000 genomes] |
| rs2045913 | 0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs2045915 | 0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes] |
| rs2045917 | 0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs2045918 | 0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs2126984 | 0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes] |
| rs2384273 | 0.85[EUR][1000 genomes] |
| rs2505631 | 0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes] |
| rs2505639 | 0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes] |
| rs2505640 | 0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes] |
| rs34304999 | 0.98[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs34375045 | 0.98[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs34481177 | 0.97[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs34605125 | 0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs34630580 | 0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs34776628 | 0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs34779708 | 0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes] |
| rs34876468 | 0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs34954932 | 0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs35079558 | 0.87[EUR][1000 genomes] |
| rs35126129 | 0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs35146199 | 0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes] |
| rs35777088 | 0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs35784065 | 0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs35814343 | 0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs35847586 | 0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs36123879 | 0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes] |
| rs3780886 | 0.87[EUR][1000 genomes] |
| rs4294520 | 0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs4934533 | 0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes] |
| rs4934535 | 0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs4934536 | 0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs4934537 | 0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs4934538 | 0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs4934539 | 0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs4934540 | 0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs4934694 | 0.86[EUR][1000 genomes] |
| rs4934704 | 0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes] |
| rs4934711 | 0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs4934715 | 0.86[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs4934716 | 0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs4934718 | 0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs4934721 | 0.80[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs4934723 | 0.80[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs4934724 | 0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes] |
| rs4934725 | 0.82[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes] |
| rs4934730 | 0.94[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs4934731 | 0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes] |
| rs4934732 | 0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs4934734 | 0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs4934735 | 0.84[EUR][1000 genomes] |
| rs4934736 | 0.84[EUR][1000 genomes] |
| rs4934737 | 0.84[EUR][1000 genomes] |
| rs55724039 | 0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs57081218 | 0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes] |
| rs57786297 | 0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes] |
| rs61104795 | 0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs6481941 | 0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes] |
| rs67976880 | 0.98[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs7070427 | 0.86[EUR][1000 genomes] |
| rs7077242 | 0.87[EUR][1000 genomes] |
| rs7079389 | 0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs7079498 | 0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes] |
| rs7084196 | 0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs7099593 | 0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs72789687 | 0.98[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs72789690 | 0.80[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes] |
| rs72791815 | 0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs7900480 | 0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes] |
| rs7913615 | 0.93[EUR][1000 genomes];0.80[ASN][1000 genomes] |
| rs878264 | 0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs9663401 | 0.90[EUR][1000 genomes] |
| rs9665538 | 0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes] |
| rs9787566 | 0.90[EUR][1000 genomes] |
| rs998658 | 0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| CUL2 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014