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rVarBase
SNP Report
Basic Infomation
Name
rs10897131  
dbSNP
Location
chr:11,60764664
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 4)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs2283263
0.90[ASN][1000 genomes]
rs2905513
0.90[ASN][1000 genomes]
rs3016178
0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs916811
0.91[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
CD6
Distal transcriptional regulation
CD6
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)