SNP Report
| Name | rs10875742   dbSNP |
|---|---|
| Location | chr:12,48493374 |
| Allele | G/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11612970 | 0.82[ASN][1000 genomes] |
| rs11613485 | 0.84[ASN][1000 genomes] |
| rs12580764 | 0.86[ASN][1000 genomes] |
| rs12581972 | 0.88[ASN][1000 genomes] |
| rs1476608 | 0.90[ASN][1000 genomes] |
| rs17122611 | 0.86[ASN][1000 genomes] |
| rs17122612 | 0.86[ASN][1000 genomes] |
| rs17122613 | 0.86[ASN][1000 genomes] |
| rs17122651 | 0.91[ASN][1000 genomes] |
| rs1968071 | 0.91[ASN][1000 genomes] |
| rs3742074 | 0.86[ASN][1000 genomes] |
| rs4589362 | 0.88[ASN][1000 genomes] |
| rs57054831 | 0.91[ASN][1000 genomes] |
| rs57380031 | 0.86[ASN][1000 genomes] |
| rs58046797 | 0.91[ASN][1000 genomes] |
| rs59766465 | 0.86[ASN][1000 genomes] |
| rs60567660 | 0.90[ASN][1000 genomes] |
| rs60681522 | 0.86[ASN][1000 genomes] |
| rs7133249 | 0.86[ASN][1000 genomes] |
| rs72644843 | 0.86[ASN][1000 genomes] |
| rs72644844 | 0.86[ASN][1000 genomes] |
| rs7296913 | 0.91[ASN][1000 genomes] |
| rs7312326 | 0.88[ASN][1000 genomes] |
| rs7963934 | 0.88[ASN][1000 genomes] |
| rs7971668 | 0.86[ASN][1000 genomes] |
| Symbol | Regulation type |
|---|---|
| SENP1 | Proximal transcriptional regulation |
| PFKM | Distal transcriptional regulation |
| SENP1 | Distal transcriptional regulation |
| ASB8 | Distal transcriptional regulation |
| SENP1 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014




