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rVarBase
SNP Report
Basic Infomation
Name
rs10784221  
dbSNP
Location
chr:12,40256762
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 9)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10877703
0.90[CEU][hapmap]
rs11173704
1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs11173979
1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs11174097
0.82[CEU][hapmap]
rs11174134
0.90[CEU][hapmap]
rs12312400
0.90[CEU][hapmap]
rs2029970
0.85[CEU][hapmap];0.82[EUR][1000 genomes]
rs4277185
0.91[CEU][hapmap]
rs7963790
0.85[CEU][hapmap];1.00[YRI][hapmap];0.83[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
C12orf40
RNA binding protein mediated regulation
SLC2A13
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)