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rVarBase
SNP Report
Basic Infomation
Name
rs10506151  
dbSNP
Location
chr:12,40670998
Allele
C/A
LD-proxy of rSNPs(r
2
>0.8) (count: 7)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10878343
1.00[YRI][hapmap]
rs10878372
1.00[YRI][hapmap]
rs10878538
1.00[JPT][hapmap]
rs11175958
1.00[YRI][hapmap]
rs12423862
1.00[YRI][hapmap]
rs17444145
0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4768252
1.00[YRI][hapmap]
rSNP related genes
Symbol
Regulation type
LRRK2
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 2)
eQTL related gene
Source
CPNE8
SCAN
PDZRN4
SCAN