SNP Report
Basic Infomation
| Name | rs10483813 dbSNP |
|---|---|
| Location | chr:14,69031284 |
| Allele | T/A |
LD-proxy of rSNPs(r2>0.8) (count: 19)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10483812 | 0.91[CEU][hapmap];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes] |
| rs11621276 | 0.85[CEU][hapmap];0.87[AMR][1000 genomes] |
| rs11624097 | 0.81[CEU][hapmap] |
| rs11624164 | 0.80[CEU][hapmap] |
| rs11624333 | 0.80[CEU][hapmap] |
| rs11628293 | 0.95[CEU][hapmap];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes] |
| rs12889251 | 0.86[CEU][hapmap];0.87[AMR][1000 genomes] |
| rs17755925 | 0.86[CEU][hapmap];0.88[AMR][1000 genomes] |
| rs17756000 | 0.91[CEU][hapmap];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes] |
| rs17756147 | 1.00[AMR][1000 genomes];0.99[EUR][1000 genomes] |
| rs17828907 | 0.85[CEU][hapmap];0.91[AMR][1000 genomes] |
| rs17828955 | 0.91[CEU][hapmap];0.91[AMR][1000 genomes];0.80[EUR][1000 genomes] |
| rs2158357 | 0.95[CEU][hapmap];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes] |
| rs34636650 | 0.91[AMR][1000 genomes] |
| rs71423314 | 0.85[AMR][1000 genomes] |
| rs71423316 | 0.90[AMR][1000 genomes] |
| rs71423317 | 0.88[AMR][1000 genomes] |
| rs71423318 | 0.91[AMR][1000 genomes] |
| rs999737 | 1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ZFP36L1 | Distal transcriptional regulation |
| RAD51B | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014