SNP Report
Basic Infomation
| Name | rs10483810 dbSNP |
|---|---|
| Location | chr:14,68992974 |
| Allele | G/T |
LD-proxy of rSNPs(r2>0.8) (count: 29)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10130177 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs10134240 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs10137367 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs10147979 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs10148391 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs10483811 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs10483814 | 1.00[CHB][hapmap] |
| rs11849344 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs17105810 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs17105812 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs17105828 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs17105829 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs17829180 | 0.84[CEU][hapmap];1.00[CHB][hapmap] |
| rs17829192 | 1.00[CHB][hapmap] |
| rs28377700 | 1.00[ASN][1000 genomes] |
| rs2842339 | 0.82[CEU][hapmap];1.00[CHB][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes] |
| rs2842343 | 0.90[CEU][hapmap];0.97[EUR][1000 genomes] |
| rs2842344 | 0.90[CEU][hapmap];0.97[EUR][1000 genomes] |
| rs28454359 | 1.00[ASN][1000 genomes] |
| rs28492919 | 1.00[ASN][1000 genomes] |
| rs28671277 | 1.00[ASN][1000 genomes] |
| rs57947677 | 0.80[AMR][1000 genomes];0.97[EUR][1000 genomes] |
| rs59404246 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs61985771 | 0.83[AMR][1000 genomes];0.97[EUR][1000 genomes] |
| rs61985772 | 0.94[AMR][1000 genomes];0.97[EUR][1000 genomes] |
| rs72727502 | 1.00[ASN][1000 genomes] |
| rs72729521 | 1.00[ASN][1000 genomes] |
| rs8017678 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs9323515 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ENSG00000259038 | Distal transcriptional regulation |
| ZFP36L1 | Distal transcriptional regulation |
| RAD51B | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 1)
| eQTL related gene | Source |
|---|---|
| TMED8 | SCAN |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014