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rVarBase
SNP Report
Basic Infomation
Name
rs10402441  
dbSNP
Location
chr:19,10231925
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 6)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11668190
1.00[LWK][hapmap];1.00[TSI][hapmap]
rs11672866
1.00[LWK][hapmap]
rs2305793
1.00[LWK][hapmap]
rs5030400
1.00[TSI][hapmap]
rs5495
1.00[LWK][hapmap]
rs7247491
1.00[LWK][hapmap]
rSNP related genes
Symbol
Regulation type
EIF3G
Proximal transcriptional regulation
DNMT1
Distal transcriptional regulation
OLFM2
Distal transcriptional regulation
ANGPTL6
Distal transcriptional regulation
MIR4322
Distal transcriptional regulation
ENSG00000267534
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)