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rVarBase
SNP Report
Basic Infomation
Name
rs1026422  
dbSNP
Location
chr:7,50319807
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 7)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs1026423
0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17552904
0.94[ASN][1000 genomes]
rs17634369
0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2219345
0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4917015
0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs921913
0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs921914
0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
ENSG00000235620
Proximal transcriptional regulation
ENSG00000235620
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)