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rVarBase
SNP Report
Basic Infomation
Name
rs10078598  
dbSNP
Location
chr:5,96397873
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 3)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10070317
0.94[AFR][1000 genomes]
rs2098593
0.94[AFR][1000 genomes]
rs9314187
0.94[AFR][1000 genomes]
rSNP related genes
Symbol
Regulation type
SETP22
Proximal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)