SNP Report
Name | rs6586030   dbSNP |
---|---|
Location | chr:10,82254047 |
Allele | A/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10788586 | 0.85[CHD][hapmap] |
rs11185951 | 1.00[JPT][hapmap] |
rs11185982 | 1.00[JPT][hapmap] |
rs11186024 | 1.00[JPT][hapmap] |
rs1340375 | 0.85[CHD][hapmap] |
rs1340376 | 0.85[CHD][hapmap] |
rs1340380 | 0.85[CHD][hapmap] |
rs1417221 | 0.85[CHD][hapmap] |
rs1572819 | 0.85[CHD][hapmap] |
rs1870137 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[ASN][1000 genomes] |
rs1870138 | 1.00[ASN][1000 genomes] |
rs1870140 | 0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1870142 | 0.85[CHD][hapmap] |
rs1890889 | 0.85[CHD][hapmap] |
rs1902660 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes] |
rs1934692 | 0.85[CHD][hapmap] |
rs1934694 | 0.85[CHD][hapmap] |
rs2050824 | 1.00[JPT][hapmap] |
rs2343306 | 1.00[CHD][hapmap] |
rs4536152 | 0.85[CHD][hapmap] |
rs4934139 | 0.85[CHD][hapmap] |
rs4934169 | 0.85[CHD][hapmap] |
rs6586028 | 1.00[ASN][1000 genomes] |
rs7080009 | 0.83[AFR][1000 genomes];1.00[ASN][1000 genomes] |
rs7082102 | 0.85[CHD][hapmap] |
rs7082705 | 0.85[CHD][hapmap] |
rs7096348 | 1.00[JPT][hapmap] |
rs7096909 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
rs7097656 | 0.84[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.89[MEX][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];1.00[ASN][1000 genomes] |
rs7896832 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes] |
rs7900536 | 1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.89[MEX][hapmap];1.00[ASN][1000 genomes] |
rs7910643 | 1.00[ASN][1000 genomes] |
rs7922621 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes] |
rs9633740 | 0.83[CEU][hapmap];1.00[CHB][hapmap] |
Symbol | Regulation type |
---|---|
TSPAN14 | Distal transcriptional regulation |
TSPAN14 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014