SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 8)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11041476	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11041487	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs55840650	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs56014530	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs61868760	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs61868761	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs907611	0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs907613	0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
LSP1	Proximal transcriptional regulation
MIR4298	Distal transcriptional regulation
MRPL23-AS1	Distal transcriptional regulation
ENSG00000232987	Distal transcriptional regulation
H19	Distal transcriptional regulation
MIR675	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)