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rVarBase
SNP Report
Basic Infomation
Name
rs1887428  
dbSNP
Location
chr:9,4984530
Allele
G/C
LD-proxy of rSNPs(r
2
>0.8) (count: 1)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10758669
0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
JAK2
Proximal transcriptional regulation
INTS6
Distal transcriptional regulation
ENSG00000269305
Distal transcriptional regulation
ENSG00000243754
Distal transcriptional regulation
MIR101-2
Distal transcriptional regulation
ENSG00000228165
Distal transcriptional regulation
ENSG00000270070
Distal transcriptional regulation
ENSG00000233186
Distal transcriptional regulation
RCL1
Distal transcriptional regulation
HNRNPL
Distal transcriptional regulation
PPAPDC2
Distal transcriptional regulation
AK3
Distal transcriptional regulation
ENSG00000238362
Distal transcriptional regulation
RNF146
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)