SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 13)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs16950687	0.85[CEU][hapmap]
rs17293443	1.00[YRI][hapmap]
rs17293632	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1866316	1.00[CEU][hapmap]
rs2033784	0.95[CEU][hapmap]
rs4562997	0.95[CEU][hapmap]
rs56062135	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56375023	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7174445	0.95[CEU][hapmap]
rs72743461	0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72743477	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs72743482	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs8032739	0.95[CEU][hapmap]

rSNP related genes

Symbol	Regulation type
SMAD3	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)