Chromatin Accessibility

Duke DNaseI HS

Open Chromatin by DNaseI HS from ENCODE/OpenChrom(Duke University)

UNC FAIRE

Open Chromatin by FAIRE from ENCODE/OpenChrom(UNC Chapel Hill)

UW DNaseI DGF

DNaseI Digital Genomic Footprinting from ENCODE/University of Washington

UW DNaseI HS

DNaseI Hypersensitivity by Digital DNaseI from ENCODE/University of Washington

Chromatin Interactions

GIS ChIA-PET

Chromatin Interaction Analysis Paired-End Tags (ChIA-PET) from ENCODE/GIS-Ruan

UMass 5C

Chromatin Interactions by 5C from ENCODE/Dekker Univ. Mass.

DNA Methylation

HAIB Methyl450

CpG Methylation by Methyl 450K Bead Arrays from ENCODE/HAIB

Histone Modification

Broad Histone

Histone Modifications by ChIP-seq from ENCODE/Broad Institute

SYDH Histone

Histone Modifications by ChIP-seq from ENCODE/Stanford/Yale/Davis/Harvard

UW Histone

Histone Modifications by ChIP-seq from ENCODE/University of Washington

RNA Binding Proteins

SUNY RIP GeneST

RNA Binding Protein Associated RNA by RIP-chip GeneST from ENCODE/SUNY Albany

SUNY RIP-seq

RIP-seq from ENCODE/SUNY Albany

SUNY Tiling

RBP Associated RNA by Tiling Array from ENCODE/SUNY Albany

SUNY Switchgear

RNA Binding Protein Associated RNA by SwitchGear from ENCODE/SUNY Albany

Transcription Factor Binding Sites

HAIB TFBS

Transcription Factor Binding Sites by ChIP-seq from ENCODE/HAIB

SYDH TFBS

Transcription Factor Binding Sites by ChIP-seq from ENCODE/Stanford/Yale/USC/Harvard

UChicago TFBS

Transcription Factor Binding Sites by Epitope-Tag ChIP-seq from ENCODE/University of Chicago

UTA TFBS

Open Chromatin TFBS by ChIP-seq from ENCODE/Open Chrom(UT Austin)

UW CTCF Binding

CTCF Binding Sites by ChIP-seq from ENCODE/University of Washington